Simulated M, microarray.

Author

Bertrand Frederic, Myriam Maumy-Bertrand.

Examples


data(M)
head(M)
#> $omicsarray
#>        log(S/US) : P1T1 log(S/US) : P1T2 log(S/US) : P1T3
#> gene 1         41.37771         42.22949       -31.925168
#> gene 2        478.62824        -23.91318         8.973348
#> gene 3       -655.65836        112.79919       182.380283
#> gene 4       -759.88206        -20.11196       -39.990416
#> gene 5       -159.70735        -20.89569      -105.649285
#> gene 6        295.70161        -11.37047       187.563254
#> 
#> $name
#> [1] "gene 1" "gene 2" "gene 3" "gene 4" "gene 5" "gene 6"
#> 
#> $gene_ID
#> [1] "gene 1" "gene 2" "gene 3" "gene 4" "gene 5" "gene 6"
#> 
#> $group
#> [1] 1 1 1 1 1 1
#> 
#> $start_time
#> [1] 0
#> 
#> $time
#> [1] 1 2 3 4
#> 
#> $subject
#> [1] 5
#> 
str(M)
#> Formal class 'omics_array' [package "Patterns"] with 7 slots
#>   ..@ omicsarray: num [1:100, 1:20] 41.4 478.6 -655.7 -759.9 -159.7 ...
#>   .. ..- attr(*, "dimnames")=List of 2
#>   .. .. ..$ : chr [1:100] "gene 1" "gene 2" "gene 3" "gene 4" ...
#>   .. .. ..$ : chr [1:20] "log(S/US) : P1T1" "log(S/US) : P1T2" "log(S/US) : P1T3" "log(S/US) : P1T4" ...
#>   ..@ name      : chr [1:100] "gene 1" "gene 2" "gene 3" "gene 4" ...
#>   ..@ gene_ID   : chr [1:100] "gene 1" "gene 2" "gene 3" "gene 4" ...
#>   ..@ group     : int [1:100] 1 1 1 1 1 1 1 1 1 1 ...
#>   ..@ start_time: num 0
#>   ..@ time      : int [1:4] 1 2 3 4
#>   ..@ subject   : num 5