A example of an inferred cascade network (4 groups case).

This dataset is a cascade network example with 102 nodes, 4 times and 4 groups.

Format

The format is: chr "networkCascade"

Details

A network class object [package "Patterns"] with 6 slots.

Author

Bertrand Frederic, Myriam Maumy-Bertrand.

Examples

data(networkCascade)
str(networkCascade)
#> Formal class 'omics_network' [package "Patterns"] with 6 slots
#>   ..@ omics_network: num [1:102, 1:102] 0 0 0 0 0 0 0 0 0 0 ...
#>   ..@ name         : chr [1:102] "210226_at" "233516_s_at" "202081_at" "236719_at" ...
#>   ..@ F            : num [1:4, 1:4, 1:16] 0 0 0 0 0 0 0 0 0 0 ...
#>   ..@ convF        : num [1:16, 1:5] 0.0703 0.0703 0.0703 0.0703 0.0703 ...
#>   .. ..- attr(*, "dimnames")=List of 2
#>   .. .. ..$ : NULL
#>   .. .. ..$ : chr [1:5] "convF" "cc" "cc" "cc" ...
#>   ..@ convO        : num [1:5] 0.94249 0.00625 0.00157 0.00101 0.0008
#>   ..@ time_pt      : num [1:4] 60 90 210 390
plot(networkCascade)