Package index

All functions

PLL()

Generic function for extracting the predictive partial log-likelihood

PLL(<coxph>)

Predictive partial log-likelihood for Cox poportional hazards model

aggregation.brier()

Determine the Brier score for a fitted model

aggregation.misclass()

Determine the missclassification rate for a fitted model

aggregation.pmpec()

Determine the prediction error curve for a fitted model

complexity.LASSO()

Interface for selection of optimal parameter for lasso fit

extract.fun()

Extract functions, libraries and global variables to be loaded onto a compute cluster

fit.LASSO()

Interface function for fitting a generalised linear model with the lasso

fit.coxph()

Interface function for fitting a Cox proportional hazards model

ipec()

Integrated prediction error curve

peperr()

Parallelised Estimation of Prediction Error

perr()

Prediction error estimates

plot(<peperr>)

Plot method for peperr object

pmpec()

Calculate prediction error curves

predictProb()

Generic function for extracting predicted survival probabilities

predictProb(<coxph>)

Extract predicted survival probabilities from a coxph object

predictProb(<survfit>)

Extract predicted survival probabilities from a survfit object

resample.indices()

Generation of indices for resampling Procedure